species:   Bodot
pid:       PID1062
parent:    Bd-milR15
paralog:   
locus:     SACU01000011.1:1816600-1816711
matures:   ['UACGAGGACCAAUUCAUAGAAUU', 'UUCAUGGUCUGCGCCUUGGAA']
srr:       SRR8374847
genome:    /Users/jax/+Genomes/Fungal_genomes/Bodot.GCA_011064635.1_ASM1106463v1_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Hu2019-my.SRR8374847.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Hu2019-my.SRR8374847.cram SACU01000011.1:1816600-1816711

0 out of bounds
12 alignments
12 proper strand
8 stranded perfect matches

        *************************                                                ***********************        
CGUCCUGGUUUACGAGGACCAAUUCAUAGAAUUUGUUACUUCCAUGCCGGAAGAAUACAACAUCUACGGUCUUGGAGAGCGUAUUCAUGGUCUGCGCCUUGGAACCAAUUUC
.....((((((.(((((..((..((((.((((.((((.((.(((.((((..(((........))).))))..))))))))).))))))))..))..))))))))))).....
----------UACGAGGACCAAUUCAUAGAAUU------------------------------------------------------------------------------- l=23 a=5 c
-----------------------------------------------------------------------------------UUCAUGGUCUGCGCCUUGGAA-------- l=21 a=0 c*
----------UACGAGGACCAAUUCAUAGAAUU------------------------------------------------------------------------------- l=23 a=5 ma
-----------------------------------------------------------------------------------UUCAUGGUCUGCGCCUUGGAA-------- l=21 a=0 ma*

----------UACGAGGACCAAUUCAUAGAAU-------------------------------------------------------------------------------- l=22 a=1 
----------UACGAGGACCAAUUCAUAGAAUc------------------------------------------------------------------------------- l=23 a=2 
----------UACGAGGACCAAUUCAUAGAAUU------------------------------------------------------------------------------- l=23 a=5 (c,ma)
----------UACGAGGACCAAUUCAUAGAAUUU------------------------------------------------------------------------------ l=24 a=2 
----------UACGAGGACCAAUUCAUAGAAUUUGa---------------------------------------------------------------------------- l=26 a=2 

mb-01011
ax-1001011
ku-01
ss-111111101110
fn-111
